Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLFHLKFLKPLSCLQAGLLYSLIFGVLYHFPLFAYVYKESNQVSFIAMIIIVLFCVNGALFLALGLISAYLMRWSAIVFSWLNSVAFYFISAYKVFLNKSMMGNVLNTNTHEVLGFLSVKLFVFIVVFGVLPGYVIYKIPLKNSSKKAPFLAILALVFIFIASAFMNAKNWLWFDKHAKFIGGLILPFAYSVNAFRVSALKFFAPTIKPLPLFSPNHSHSFVVLVIGESARKSNYALYGYEKPTTPRLSKRLEN-HELTLFNATSCA--TYTTASLECILDSSFKNSL---------GAYENLPTYLTKAGVKVFWYSANDGEK-NV----KVTSYLKNYE--LIQKC-PNCEAIAPYDESLLYNLPNLLKERSNENILLILHLAGSHGPNYDNKVPLNFRVFKPYCSSADLSSCSKESLINAYDNTIFYNDYLLDKIISMLENAK--QPALMIYLSDHGESLGEGAY-----YLHGIPKSIAP--KEQYEIPFILYANDLFKEKHSIIQTQTPINQNTIFHSVLGVFEDFKTPSAVYRPSLDLLKHKKE |
| 2W8D Chain:A ((27-325)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLAHDNETFYFDNFFHQTGQGKTSDAEFMMENSLYPLAQGSVFVNKAQNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEMYKAEGIDKFFDSAYYDMNEENTKNYGMKDKPFFKESMPLLES-LPQPFYTKFITLSNHFP-FG--MDEGDTDFPAG--------DFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYGISENHNKAMAKVLGKDEI--TDYDNAQLQRVPLFIHAAGVK----G-EKVHKYAGDVDVAPTILHLLGVDTKDYLMSGSDILSKEHREV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133575 for 2173 contacts (-61.5/contact) +
2D Compatibility (PS) -29134 + (NN) -14147 + (LL) 20532
1D Compatibility (HY) -4000 + (ID) 1750
Total energy: -162074.0 ( -74.59 by residue)
QMean score : 0.309
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