Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFEMLYSKIHRATITDANLNYIGSITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKK-RGKICVNGAAARKVAIGDVVIILAYASMNEDEINTHKPSIVLVDEKNEILEKG
2EEO Chain:B ((1-91))
-------------------------VTVDQDLLDAAGILPFEQVDIYDITNGARLTTYALPGERGSGVIGINGAAAHLVKPGDLVILVAYGVFDEEEARNLKPTVVLVDERNRILEVR
General information:
TITO was launched using:
RESULT:
Template:
2EEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40519 for 557 contacts (-72.7/contact) +
2D Compatibility (PS) -9790 + (NN) -1801 + (LL) 1988
1D Compatibility (HY) -8000 + (ID) 2050
Total energy: -60172.0 ( -108.03 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2EEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EEO-query.scw
PDB file :
Tito_Scwrl_2EEO.pdb
: