Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEIILITGAYGMVGQNTALYFKKNKPDVTLLTPKKS-------------ELYLLDKDNVQAYLKEYKPTGIIHCAGRVGGIVANMNDLSTYMVENLLMGLYLFSSALDLGVKKAINLASSCAYPKYAPN----PLKESDLLNGSLEPTNEGYALAKLSVMKYCEYVSAEKGVFYKTLVPCNLYG-EFDKFEEKIAHMIPGLIARMHTAKLKNEKNFAMWGDGTARREYLNAKDLARFIALAYENIAQMPSVMNVGSGVDYSIEEYYEKVAQVLDYKGVFVKDSSKPVGMQQKLMDISKQKA-LKWELEIPLEQGIKEAYEYYLKLLEV |
| 4ZRM Chain:A ((6-311)) | ----ILVTGGAGFIGSHVVDKLIENGYGVIVVDNLSSGKVENLNRNALFYEQSIEDEEMMERIFSLHRPEYVFHLAAQ-ASVAISVREPARDAKTNIIGSLVLLEKSIKYGVKKFI--FSSTGGAIYGENVKVFPTPETEIPH-PISP----YGIAKYSTEMYLEFFAREYGLKYTVLRYANVYGPRQDPYGEA------GVVA-IFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAMEKGDN--EVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKGDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVEYFRKTL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141463 for 2517 contacts (-56.2/contact) +
2D Compatibility (PS) -30893 + (NN) -13549 + (LL) 1584
1D Compatibility (HY) -17600 + (ID) 3850
Total energy: -205771.0 ( -81.75 by residue)
QMean score : 0.506
|
|
|