Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVSRFLNAIDPFNLGVLLSRFQIKNGCIYGVCSYKVSKFTPGYEESKARVLNALNILSKHQIWQSNQESVTKVKGTFVFILENDLHLDENSFYKKLLNLIIDNDFFNRSHLVTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNPSR
4FT4 Chain:B ((679-734))
------------------------------------------------------------------------------------------------------------------PHNQVIIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALGYCLGQAYLGESEGSD
General information:
TITO was launched using:
RESULT:
Template:
4FT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7718 for 295 contacts (-26.2/contact) +
2D Compatibility (PS) -6235 + (NN) -4687 + (LL) 8100
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -14140.0 ( -47.93 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_4FT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FT4-query.scw
PDB file :
Tito_Scwrl_4FT4.pdb
: