Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEASSYLASSQNSSHNNQSIDPQALRENLKESYLKAWYSPWLDAKVKSNKKEVFWILKEMNKSTGYGEDLKPNAKAFNDELIKNMDIERYPSTKIKAVVVRNNDVRAVPTNKPYYLSPKGYPFDRFQNSLVFPGTPVLITPFNPDKTYPPLQSSFVYGWIKVSELAYMRDKEIELLTKLKNYDMPIKE---KNPLYTDY---GEFYPHAKIGELFPLIPQIQNASQIPPKKELKAYGFLKDAKGYAALQSVFLDEKDFFVFPKAFTSEIMAYFINTMLGQKYGWGGLLGNRDCSAFTRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYIIKNATPFGTLIYLKGHIMLYLGERNHQAIVAHSIWSVQTQKHFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVHKTSSPLNAN |
| 1XOV Chain:A ((196-324)) | --------------------------------------------------------------------------------------------------------------------------HSGAVVDSVPMLSKMDFKSS------------PIKMYKAGSSLLVYEH--NKYWYKAYINDKLCYIYKSFCISNGKKDAK----GRIKVRIKSAKDLRIPVWNNTKLNSGKIKWYSPGTKLSWYDN---K-----KGYLELWYE-KDGWYYTANYFLK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6844 for 802 contacts (8.5/contact) +
2D Compatibility (PS) -13133 + (NN) -330 + (LL) 21228
1D Compatibility (HY) 400 + (ID) 850
Total energy: 14159.0 ( 17.65 by residue)
QMean score : 0.095
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