Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFE-ENELLKESAYTQPAIYLVSYIAYQLLNKQA-NGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKN---VWCANFNGGMQVVLAGVKDDLKALEPTLK---EMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKS-NNDRVDVFFELGCGSVLKGLNKRLS-NKPTISVGDNKGLDEAIEFLEEYV |
| 3QAT Chain:A ((5-316)) | MGAAFTFPGQGSQLIGMGKVLTEQFVAARMVFEEVDDALSEKLSDIIFEGPADVLTLTANAQPALMAVSMAVIRVMEQLGLNVEKKVKFVAGHSLGEYSALCAAGTFSLTDTARLLRIRGNAMQAAVAVGEGSMAALIGLDEKDVEEICEIVAEEGLCQIANDNGGGQIVISG---EAKAVETAVEVASQKGAKRAVLLPVSAPFHSALMQPAANAMKNALLTVNKTAPIVPLIANVSVIPESDPERIVSLLVQQVTGRVRWRETIEWISANGVNTLFEIGSGKVLTGLARRINKDIKALTVGTAEEIEAALRVLGV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187527 for 2741 contacts (-68.4/contact) +
2D Compatibility (PS) -32715 + (NN) -12996 + (LL) 388
1D Compatibility (HY) -16000 + (ID) 4850
Total energy: -253700.0 ( -92.56 by residue)
QMean score : 0.566
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