Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLFSVYLFLSLNPLFLEAKEITWSQFLENFKNKNEDDKPKPLTIDKNNEKQQILDKNQQILKRALEKSLKFFFIFGYNYSQAAYSTTNQNLTLTANSIGFNTATGLEHFLRNHPKVGFRIFSVYNYFHSVSLSQPQILMVQNYGGALDFSWIFVDKKTYRFRSYLGIALEQGVLLVDTIKTGSFTTIIPRTKKTFFQAPLRFGFIVDFIGYLSLQLGIEMPLVRNVFYTYNNHQERFKPRFNANLSLIVSF |
| 3NB3 Chain:A ((5-170)) | ----------------------------------------------------------------------NTWYTGAKLGWSQ------------HENKLGAGAFGGYQ--VN--PYVGFEMGYDWLGRMPY------AYKAQGVQLTAKLGYPI--TD--DLDIYTRLGGMVWRADTYSNV-------YGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN------------------GMLSLGVSYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33094 for 941 contacts (-35.2/contact) +
2D Compatibility (PS) -13710 + (NN) 1367 + (LL) 8004
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -39833.0 ( -42.33 by residue)
QMean score : 0.083
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