Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDEHNQEHDHL---------SPKEPESYQKAYACKEQQGEEKQE-ASEKEGEIKED---FELKYQEMREQYLRVHADFENVKKRLERDKSMA-LEYAYEKIALDLLPVIDALLGAHKSAVEVDKESALTKG---LELTMEKLHEVLARHGIEGIECLEE-FDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAKND |
3VKH Chain:A ((1912-2093)) | -RDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARE--LQVQLDVRNKEIAVQKVKAYADLEKA-EPAIIEAQEAVSTIKKKH-----LDEIKSLPKPPTPVKLAMEAVCLMLGGKKLEWADIRKKIMEPNFITSIINYDTKKMMTPKIREAITKGYLEDPGFDYETVNRASKAC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14451 for 795 contacts (18.2/contact) +
2D Compatibility (PS) -17559 + (NN) -6296 + (LL) 988
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -17366.0 ( -21.84 by residue)
QMean score : 0.419
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