Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINTHYTPNFTQLQTLNNINNDATIKDRNQAEQDLQQSSIQDGFSQDNTQNAPDFDRLQALNAINNDGEIKDKSQVEKSLVDGENTPEIYSSLDTYA
2Z4V Chain:A ((212-267))
-------------------------IRDDYLNLKDFQ-------FAEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQIL
General information:
TITO was launched using:
RESULT:
Template:
2Z4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 24574 for 280 contacts (87.8/contact) +
2D Compatibility (PS) -5478 + (NN) -3713 + (LL) 1376
1D Compatibility (HY) -2800 + (ID) 650
Total energy: 13309.0 ( 47.53 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_2Z4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z4V-query.scw
PDB file :
Tito_Scwrl_2Z4V.pdb
: