Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------------MPKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSLLCRA-----
1R7L Chain:A ((-6-96))
AMKPRDINKLIASKIFGYEIKDDNIIKDGRYRLGIPLYSQNIESAWQVVEKLE-----YDVKVTK-TDLKPKYQVHVFVPGGVKMVFAETAPMAICKGALASV
General information:
TITO was launched using:
RESULT:
Template:
1R7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 32335 for 303 contacts (106.7/contact) +
2D Compatibility (PS) -5864 + (NN) 3362 + (LL) 548
1D Compatibility (HY) 2000 + (ID) 100
Total energy: 32281.0 ( 106.54 by residue)
QMean score : -0.010
(partial model without unconserved sides chains):
PDB file :
Tito_1R7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R7L-query.scw
PDB file :
Tito_Scwrl_1R7L.pdb
: