Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFEGHAEF-NMVKD----------FCSRVYELSEFLDKKLQVKYEDKG-EPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKM----G---SLTKPMHFYDFLASRLGL |
3KWL Chain:A ((233-477)) | KTCALFNAYAKHLDVQSLLKSAKLYLEKMGQKTIDLPFCYDGGYYGK-IISTHDFLTASAYNLALAKANGVSLIFCEEDAYLNILHAKEVLDNN-PEIINSVNEKLKKYQLVYEKDIEIVYLNEWVNEFLAWE-LKSPFDAFVGA-EFSRIK-QS-DHFFNKI-------HLKAPHFLESFQN-YAPL-LEVNEASGLLQCAHLRYLG-IDLGADFLIAHSLGLFYAFENLSLKASKIYKRDNDNTPTLFLPQIALMAMGE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10693 for 1790 contacts (-6.0/contact) +
2D Compatibility (PS) -23564 + (NN) -1824 + (LL) 1604
1D Compatibility (HY) 2400 + (ID) 700
Total energy: -32777.0 ( -18.31 by residue)
QMean score : 0.173
|
|
|