Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFYQVYDPLGHIWLSALVALSPIALFFISLIVFKLKGYSAGFLSLALSILIALFVYKMPVQMVSASFFYGFLYGLWPIAWIVIAAIFLYNLSVKSGYFEILKESILSLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCLIANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFRGIRETFPAVAVTGFSFAIAQFLSSNYLGPQLPDIISALVSLVATTLFLKFWQPKHIFTSNGKEPTISTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFKEGGALAFSNFAFEFNSISQKIFKTVPIVTEATNFPVVFKLPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMRLPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFLSPMVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFLAANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVFPFIIPVTPT |
3MP7 Chain:B ((25-55)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NWATYKRAAKITGLGIILIGLIGMLIRIVGILILGG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10818 for 118 contacts (-91.7/contact) +
2D Compatibility (PS) -3119 + (NN) -1219 + (LL) 42780
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 25724.0 ( 218.00 by residue)
QMean score : 0.388
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