Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKQILTILTPFFVA--TLLYFLGAPDGLNPNAWLYFCIFMGMIIGLILEPVPSGLIALSALVPCIALKIGASSE----VASANKAISWGLSGYANKTVWLVFVAFILGLGYEKSLLGKRIALLLIRFLGQ-TPLGLGYAIGLSELCLAPFIPSNSARSGGILYPIVSSIPPLMGSTPSNNPDKIGAYLMWVALASTCITSSMFLTALAPNPLAMEIATKMGVNEISWFSW--FLAFLPCGVVLILLVPLLAYKTCKPTLKGSKEVSLWAKKELESMGRFSLKEILMLSLTLLALLGWIFGKSLGLHAS------ATALIVMVLMAFCKIV---SYEDIIKNKSA-----------------FNIF-------LLLGSLLTMAGGL--KNVGFLNFIGNAAQNF-LEHAHLDPLIAVLFIVALFYLSHYFFASITAHVSALFALFVGIGS--HIQGVNLQELSLFLMLSLGIMGILTPYGTGPSTIYYGSG--YIQSKDFWK---------------WGFIFGFLYLIVF------LSVCAPWVKFIAYRWL |
| 2I3O Chain:D ((2-516)) | FRSRPNALSQRSVIASSSELASLAGRDILKRGG-----------------NIFDAALAVSALCVTQNNLCGLGGDLFALIRDENGQIDLNGSGQASRAVSIDYYESGLTKIPER---GPYAAITVPGIAGSWDEIFRKFATDIADI-LEPAIRTASA---GFP------ITQNYSDSIARSAPVIGQYRGWSSIFPN-----------GSVPVAGEILKQPDLAESFRLSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTDLDEFRIYETSPNSQG-ITVIEWIRGESHGYDSRTWEAKIEDIFETEEAYDKRRKITDPSYNIAQHDSANGKGLPKRDHNDIGDTTYFSISDSEGRSVSIIQSNYGFGSGIVPKGTGFV--LQNRGSYFTLQRDHPNAL-----------PGKRTFHTLAACVEKEHDLYASLGSGGDIQPQVQQILEILKDNTDPQAILDKPRWTEPYTIYEAPGAVYVESEELYRNVSKQISGRKVVLRDVSQEFGTAQITTLIRGDVVVGAADPRGDGIAIPYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -397299 for 3687 contacts (-107.8/contact) +
2D Compatibility (PS) -42520 + (NN) 16702 + (LL) 5820
1D Compatibility (HY) -1600 + (ID) 4550
Total energy: -423447.0 ( -114.85 by residue)
QMean score : 0.122
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