Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLNGLAGNLLIVVILLCVVVFFALKAIHIQKEQATNYYRYKDINALEAKNTQNHANYELVNQGSKK
3SOK Chain:A ((8-24))
------------IVVAIIGILAAFAIPAYNDYIARSQAAEGLTLADGLKVRISDHLESGECKGDANPA
General information:
TITO was launched using:
RESULT:
Template:
3SOK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10480 for 61 contacts (-171.8/contact) +
2D Compatibility (PS) -1662 + (NN) -1668 + (LL) 748
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -15762.0 ( -258.39 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_3SOK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SOK-query.scw
PDB file :
Tito_Scwrl_3SOK.pdb
: