Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MG--RAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEV-GDKIIIRGDYNSFKLLNEGFESLRLPIIKAGLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE |
1KON Chain:A ((3-237)) | --GHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKL-----DANPRLRAAVDKALSNNMTRDTLNRAIARG-----ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKC-GGNLGTDGSVAYLFSKKGVISFEKG-------DEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62838 for 1710 contacts (-36.7/contact) +
2D Compatibility (PS) -24003 + (NN) -11125 + (LL) 424
1D Compatibility (HY) -9200 + (ID) 3200
Total energy: -109942.0 ( -64.29 by residue)
QMean score : 0.606
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