Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEVLMIEDDIELAEFLSEFLLQHGIHVINYDEPYTGISAANTQNYDLLLLDLTLPNLDGLEVCRRISKQKHIPIIISSARSDVEDKIKALDYGADDYLPKPYDPKELLARIQSLLRRSHKKEEVSEPGDANIFRVDKDSREVYMHEKKLDLTRAEYEILSLLISKKGYVFSRESIAIESESINPESSNKSIDVIIGRLRSKIEKNPKQPQYIISVRGIGYKLEY
4L85 Chain:A ((3-120))
MANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILALG-----GIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRH----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4L85.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86908 for 842 contacts (-103.2/contact) +
2D Compatibility (PS) -12607 + (NN) -8511 + (LL) 7144
1D Compatibility (HY) -9200 + (ID) 2350
Total energy: -112432.0 ( -133.53 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_4L85.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L85-query.scw
PDB file :
Tito_Scwrl_4L85.pdb
: