Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFYKRVLKLHHFRNLGKNSPTK----LLLNSSFDEKHGGLVVLVGENNVGKSNVLEALKIFNDADIKLCSEEDYFKDHEKDTLLSLEE
4Q9K Chain:A ((1039-1084))
------------------NYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQL
General information:
TITO was launched using:
RESULT:
Template:
4Q9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2310 for 180 contacts (12.8/contact) +
2D Compatibility (PS) -4501 + (NN) -1057 + (LL) 1616
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -5282.0 ( -29.34 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_4Q9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q9K-query.scw
PDB file :
Tito_Scwrl_4Q9K.pdb
: