Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFK----NPELGGMSLFLQTQQLKSALRMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA |
3AJW Chain:A ((6-141)) | QHGALETLKDLAEKEVDDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSNLNMGNGIASNRWINYQQFIQTLEKAIEQHRLQLTQWTQKVDLALKSWREKKQRLQAWQTLQDRQTAAALLAENRMDQKKMDEFA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38225 for 709 contacts (53.9/contact) +
2D Compatibility (PS) -15254 + (NN) -17135 + (LL) 992
1D Compatibility (HY) 1600 + (ID) 1050
Total energy: 7378.0 ( 10.41 by residue)
QMean score : 0.610
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