Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFDNTLINLFETAP-LLTSLLAGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAK-RVSVFLKSLMFVVGFSLVFLGVGMSMAK-LIHSFSFSW------VNYIAGGIVILFGLHFLG----VFRF----AFLYKTQSVGLASKS--NSMQRFYPFLL-GMSFALGWTPCIGPIFTSIVIMSASKDAYGLM--LMVVFVMGLAIPFLLVALMLERALLFLKS-LRKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQN-------------------- |
| 3TRI Chain:A ((2-273)) | --NTSNITFIGGGNMA-RNIVVGLIA-------NGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTTEQAIKVLESGNLRELFIKALTAAVNRAKELSKTVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215058 for 1592 contacts (-135.1/contact) +
2D Compatibility (PS) -23576 + (NN) -2973 + (LL) 1080
1D Compatibility (HY) 3600 + (ID) 1500
Total energy: -238427.0 ( -149.77 by residue)
QMean score : 0.166
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