Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNDFNLLILSGPSGAGKSTLTKYLQEKIPKTH-FSLSTTTRKPREGEVDGLHYNFVSEEEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFDIDVQGHEILKKHYP--NACSVFISTKNQEILKERLLLRGTDSKETIEKRLINAYKEMQCLE--SFDYLIINEDLEKSKEIILSIAKTLVHRLKAFNFEKICKAWKNESL
1EX7 Chain:A ((4-174))
-------IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSV-KAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKELKDFIFAEK--------------------
General information:
TITO was launched using:
RESULT:
Template:
1EX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34088 for 1166 contacts (-29.2/contact) +
2D Compatibility (PS) -18883 + (NN) -12083 + (LL) 2532
1D Compatibility (HY) -10000 + (ID) 3950
Total energy: -76472.0 ( -65.58 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_1EX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX7-query.scw
PDB file :
Tito_Scwrl_1EX7.pdb
: