Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLFDFFKN--KGSAATATDRLKLILAKERTL--NLPYMEE-MRKEIIAVIQKYTKSSDIH-FKTLDGNQSVETIEVEIILPK
2KXO Chain:A ((1-83))
MSLIELLFGRKQKTATVARDRLQIIIAQERAQEGQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPE
General information:
TITO was launched using:
RESULT:
Template:
2KXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2837 for 374 contacts (-7.6/contact) +
2D Compatibility (PS) -8221 + (NN) -489 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -18297.0 ( -48.92 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_2KXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KXO-query.scw
PDB file :
Tito_Scwrl_2KXO.pdb
: