Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIWLLVWGLYSLAFLHAIETIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHY--SVLKGLVEVVPVLNKPSMLRNHRGL---YGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSVDAVLHLHDGGGYYRPVYIDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIENINAHLLHPIEKYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLESRVFYHLQAIEGLLNQLNIPFKRDFELNPNSVHALINDKSLWAKISSLPKMPLFNLRPKLNHFPLPSNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDHSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNESKPNETGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
| 2QJ8 Chain:A ((32-236)) | ----------------------LSLPVFSCNRG-EGPSLLITGGNHGNELQGPILARRLVKWLPEAQRCGRIIIVPEINPLAVQAWTRNTPIDGKNLNRVFPGRSDGSVSERIADAISRLLLP-VVDTVLDLHSFGPTWD-------CAP----SI-ISHPIA----DI-DQMTKTVSISKAFKLPVTL-----LWE--H-----NETDGMFDTLVHRQGKTFICTEFGGG------LTIYEAGVRNGLIALGLVKGKAGQTLETTSSDQLKSPSPGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAIRSAMYVQGNEEVAILARPLAR---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62486 for 1573 contacts (-39.7/contact) +
2D Compatibility (PS) -19781 + (NN) 2000 + (LL) 10536
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -76131.0 ( -48.40 by residue)
QMean score : 0.230
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