Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MYFKILATSFSLFLNSWLKRSKLSSVPFLSKRQISK-SVQAIKIDANNKAIKYPPSVDNTVHNRMLSGSLNFNTENTNPKKN-----PTTTEKWIKF |
| 1NYC Chain:A ((1-111)) | GSMYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRHGDDTSHNQYHILFIDTAHQRIKFSSFDNEEIIYILDYDDTQHILMQTSSKQGIGTSRPIVYERLV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8555 for 528 contacts (16.2/contact) +
2D Compatibility (PS) -9019 + (NN) 4305 + (LL) 196
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 537.0 ( 1.02 by residue)
QMean score : 0.121
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