Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKFSKLGFILATLGSSIGLGHIWRFPYMVGHNGGSAFVLLYLALTLSLGIAMLLVEMLIGNLGKKDVVSNYQILDPK------RKKYYPFTSFFILGGPLILSFYAV-VLGWVLYYL--FVVTFDLPKDLEQAKMQFSMLQN-GSLIWPVIGF----SACLLPTIW---------FVS-----RGIEKGIEKLNVVLMPLLFVIFIGLLIYAMTLE----SMPKALRFLFNFEIQKI-DFKVVMDALGQMFFSLSLGVGTIITYSAFTPKKENLLKSSLFI--------VLPGILISLIAGVMIFTFVFEYHADVSQGPGLVFISLPLTFAKMGISGQIVSLFFFMALVFAGITSTVSLIEPLALYLINRFNFSRLKASLWIGVVVYVLGVLVILSMNERYAKFLSFAHKSVFGWLDFITSSFLMPLGGLFSVLFIGWILNKKRSFLATKHFFSANAFKAWHFSVRFIAPVVILAIFILQFK |
| 3F4I Chain:A ((10-457)) | ----TRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGG----AQGHGTTPAIFYLLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGL-VPEPPP--TDPDSILRPFKEFLYSYIGVPKGDEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITLPAIFSQTA-GGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELKLSRKHAVLWTAAIVFFSAHLVM------------FLNKSL-DEMDFWAGTIGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAVLLVVWAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -437306 for 3505 contacts (-124.8/contact) +
2D Compatibility (PS) -41101 + (NN) -5944 + (LL) 2188
1D Compatibility (HY) -43200 + (ID) 6250
Total energy: -531613.0 ( -151.67 by residue)
QMean score : 0.299
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