Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPGLHH-----QEKLLNQCMLSQALKAMGDAELRVFL------ASVHDDLKGYEEFLSLCQKPHILALSKIDTATHKQVLQKLQEYQKYSSQF--LALVPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIEEERIDKVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKEEKSLQKLGYIYQRNRD |
| 3PQC Chain:A ((24-192)) | -----GEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFYLV--------NSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQM-VFLLVDGRIPPQDSDLMMVEWMKSL-NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLLK--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89165 for 1088 contacts (-82.0/contact) +
2D Compatibility (PS) -16523 + (NN) -3803 + (LL) 11568
1D Compatibility (HY) -14400 + (ID) 2550
Total energy: -114873.0 ( -105.58 by residue)
QMean score : 0.550
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