Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTM-------------HDFF----KQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDR---------SILGIFL-----------------PFFSKPIMFKMSIREMDSQIELYGTKLPPLKLFVMTDEEV---NFYANLKTIEQYNDYVRDLLMKFDLEKYMEEKGVQNA--- |
| 1V0D Chain:A ((85-328)) | -VSDITRFLSVFNEPHAGVIQAARQQLSDE--QAPLRQKLLADLLHHVSQNITAETREQDPSWFEGLESRFRNKSGYLRYSCESRIRGYLREVSAY-TSMVDEAAQEEYLRVLGSMCQKLKSVQYNGSYFDRGAEASSRLCTPEGWFSCQGPFDLESCLSKHSINPYGNRESRILFSTWNLDHIIEKKRTVVPTLAEAIQDGREVNWEYFYSLLFTAENLKLVHIACHKKTTHKLECDRSRIYRPQTG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43990 for 1209 contacts (-36.4/contact) +
2D Compatibility (PS) -20334 + (NN) -4337 + (LL) 388
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -72123.0 ( -59.66 by residue)
QMean score : 0.284
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