Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNA-LKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILP-EVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALK---NNACTFPKVEFHASGDVIWLERQAKEWLKL
1ZUW Chain:A ((6-254))
--IGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQH--IGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDQTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMGEHVN------IISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARDQFAKIADDWFHV
General information:
TITO was launched using:
RESULT:
Template:
1ZUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -228156 for 2155 contacts (-105.9/contact) +
2D Compatibility (PS) -25839 + (NN) -8750 + (LL) 260
1D Compatibility (HY) -17200 + (ID) 4200
Total energy: -283885.0 ( -131.73 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUW-query.scw
PDB file :
Tito_Scwrl_1ZUW.pdb
: