Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKIVVDPITRIEGHLRIEVIVDDDNVITDAFSSSTLFRGLETIIKGRDPRDAGFIAQRICGVCTYSHYKAGVTAVENALGITPPLNAQLVRSLMNMALLFHDHVVHFYTLHGLDWCDILSTLKADPIQAAKLSFKYSPYPINTGAGELKAVQKRLNDFAKSGSLGPFSNGYY--GHKTYRLNPEQNLIVLSHYLKLLEIQREAAKMTAIFGAKQPHPQSLTVGGVTSVMDILDPTRLAEWKSKFEVVANFINHAYYPDLVMAGEMFANEPSVIKGCGLRNFIAYEEVLLGKDKYLLSS-----GVVLDGDISKLHPIDESLIKEEVTHSWYQYEDTKEVQLHPYDGQTNPHYTGLKDGESVGIENKIIPAKVLDTKDKYSWIKSPRYDSKPMEVGPLSSVVVGLAAKNPYVTEVATKFLKDTKLPLEALFSTLGRTAARCIEAKTIADNGLLAFDALVENL-KSDQSTCAPYHIDKNQEYKGRYIGQVPRGMLSHWVRIKNGVVENYQAVVPSTWNAGPRDSKNQRGAYEMSLIGTKIADLTQPLEIIRTIHSFDPCIACSVHVMDFKGQSLNEFKVEPNFAKF |
| 1UBU Chain:L ((4-534)) | -SGPIVVDPVTRIEGHLRIEVEVENGKV-KNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCGVCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPR--KTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVT-CYDALTPQRIAEFEALWKETKAFVDEVYIPDLLVVAAAYKD---WTQYGGTDNFITFGE--FPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIEEHVRHSWYEGAEAR----HPWKGQTQPKYTDLHG------------------DDRYSWMKAPRYMGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGPEALFSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVG--FVNAPRGGLSHWIRIEDGKIGNFQLVVPSTWTLGPRCDKNKLSPVEASLIGTPVADAKRPVEILRTVHSFDPCIACGVH--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240810 for 4861 contacts (-49.5/contact) +
2D Compatibility (PS) -55553 + (NN) -24868 + (LL) 3956
1D Compatibility (HY) -42800 + (ID) 13050
Total energy: -373125.0 ( -76.76 by residue)
QMean score : 0.500
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