Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNFFKKIVNKIKGEEVKEKKRESVPKEELEEILI----GFDIQYDLIESLLKHL--GDLITPKQLEVALLR--FVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNVQVISAKEGSDPSSLAY--NTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ |
| 4AK9 Chain:A ((115-382)) | ---------------------------DELEEVLLVSDFGPKTALKIVDTIRKDILAGRLKSGPQIKEALKKNIFKLLTERVTTTELQLGNSRPAVLMIVGVNGGGKTTTLGKLANRFKKEGVKVLMAAGDT--AAAGEQLEVWAQRTGSEIVMA-----PRPAAVLSQAVRRAVEEDFDVVLCDTSGRLHTNYNLMEELRGCKRAVSKALSSAPNEVLLVLDGTTGLNMLAQAREFNQVIGVTGFILTKLDGTARGGCVVSVVDELSIPVKFVGVGEGIDDLQPFDAQSF----VDALFP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152677 for 2070 contacts (-73.8/contact) +
2D Compatibility (PS) -27588 + (NN) -17112 + (LL) 2944
1D Compatibility (HY) -18800 + (ID) 5150
Total energy: -218383.0 ( -105.50 by residue)
QMean score : 0.569
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