Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLEVSNQAKLPTQFGEFCIQCFREKGSNGSKDHLVIFTPNFP--QNPLVR-----LHSECLTGDALGSQKCDCGGALQMALERISKEGGLVIYLRQEGRGIGLFNKVNAYALQDKGYDTIQANEMIGFKDDERDYSIAGEILEYYRIKKMRLLTNNPLKIAALEKYAEVTRESLIVCANEHNQGYLEVKKLKMGHLL |
2IU4 Chain:A ((43-102)) | ----------------------------------TVPIISGGGSGHEPAHVGYVGSGMLAAAVTGPLFIPPK---SKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRHRGVAGTILLHKILGAFAKEGGSIDEIEQLALSLSPEIYTLGVALAPVHFPHQKTSFVLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16187 for 317 contacts (-51.1/contact) +
2D Compatibility (PS) -5828 + (NN) -2214 + (LL) 1848
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -26731.0 ( -84.32 by residue)
QMean score : 0.384
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