Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MFLVKKIGVVIMILVCFLACSQESFIKMQKKAQEQENDGSKRPS------YVDSDY-----------------------EVFSETI-------------------FLQNMVYQPIEERNA-FFQL-TKDED-NS-FNPENS---VILLNEPSDNSEKNLLSYPNDPNNNEDNANNSQKNPFLYKPKRK------TKNPKLIEYSQQDFYP---LKNGDIIMSKEGDQWLIEIQSKALKRF---------LKDQNDKDRQIQTFTFNDTKTQIAQIKGKIS-SYVYTTNNG----SLSL-RPFYESFLLEKKSDNVYTIENKALDTMEISKCQMVLKKHST-DKLDSQHKAISIDL---------------DFKKERFKSDTELFLECLKES---------------------------- |
| 4OO3 Chain:A ((3-441)) | EGFTGAPGEVKLITLDPGHFHAALVQKVSYPQVSKDVYVYAPTGFDVDEHLKRIQGFNTRAENPTAWNEIVYTGDDYLEKMLAEKKGNVMIQAGNNGKKTEYIKKTLEAGINVLSDKPMAINSQSFKLLEECFAIAKQKNIMLYDIMTERNEITTMLQRELSTIPAVYGEQLKGSPEEPAIVKESVHHLFKLVDNKPLTRPVWYLDVNQQGEGIVDVTTHLVDLVQWEAFPDQIIDYRKDIELIDANRWTTSISPEEFKQVTGTDAYPDFLKKDVEND-TLKVYCNGDIVYKIKGVTAKVSVIWNYTFPKGGGDTHFSVMKGSKADLVIRQGKEQNYQPELFVEAVKGVDLAAYEKDLTASMEKVSAEYPGVALNKVGDGVWQVEIPAKYRVGHEAHFGQVTEHFLDYLKEGKLPDWEVPNMLAKYYTTTSALDMAKAKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 56548 for 1858 contacts (30.4/contact) +
2D Compatibility (PS) -30735 + (NN) -5329 + (LL) 100
1D Compatibility (HY) -9600 + (ID) 2450
Total energy: 8534.0 ( 4.59 by residue)
QMean score : 0.073
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