Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFDYEDVQLIPNKCIVNSRSECDTTVILG----KHAFK-MPIVPANMQTIINESIAEFLAENGYFYIMHRFNGSARIP-FVKKMKERQLISSISVGVKKEECLFVEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA---RKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIENGIAYKEYFGSASEFQK-------GEKKNIEGKKIWIQHKGSLKNTLIEMHQDLQSSISYAGGRDLEAI-RKVDYVIVK-NSIFNGDTI |
| 2A7R Chain:A ((28-356)) | ---LDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGY--PQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154058 for 2817 contacts (-54.7/contact) +
2D Compatibility (PS) -34327 + (NN) -9112 + (LL) 72
1D Compatibility (HY) -17200 + (ID) 5400
Total energy: -220025.0 ( -78.11 by residue)
QMean score : 0.485
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