Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKAVFINVWYLLLTIILLIIIWRIIKLVLKDKNDSGDKGLG
1BJR Chain:I ((1-10))
--------------------------------VAQGGAAGLA
General information:
TITO was launched using:
RESULT:
Template:
1BJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1135 for 25 contacts (45.4/contact) +
2D Compatibility (PS) -1268 + (NN) -2070 + (LL) 4724
1D Compatibility (HY) -400 + (ID) 150
Total energy: 1971.0 ( 78.84 by residue)
QMean score : 0.102
(partial model without unconserved sides chains):
PDB file :
Tito_1BJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BJR-query.scw
PDB file :
Tito_Scwrl_1BJR.pdb
: