Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNPNLSFYCNECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELLS---NSLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLN---LEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAKNSFVNLLGLKKASGYAQTLKTEILNDLNALEPTYLSLQENLNALLNTLFKGKT |
2J1P Chain:A ((48-270)) | -----------------------------------------LLAGGKRVRPVLCIAA-CELVG-----GEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDIS---LDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEE-IERLRKFARCIGLLFQVVDDILDVTK--------------KLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2J1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -135611 for 1680 contacts (-80.7/contact) +
2D Compatibility (PS) -22887 + (NN) -13692 + (LL) 4036
1D Compatibility (HY) -17600 + (ID) 4900
Total energy: -190654.0 ( -113.48 by residue)
QMean score : 0.414
|
|
|