Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNPNLSFYCNECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELLS---NSLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLN---LEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAKNSFVNLLGLKKASGYAQTLKTEILNDLNALEPTYLSLQENLNALLNTLFKGKT
2J1P Chain:A ((48-270))-----------------------------------------LLAGGKRVRPVLCIAA-CELVG-----GEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDIS---LDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEE-IERLRKFARCIGLLFQVVDDILDVTK--------------KLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN---


General information:
TITO was launched using:
RESULT:

Template: 2J1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135611 for 1680 contacts (-80.7/contact) +
2D Compatibility (PS) -22887 + (NN) -13692 + (LL) 4036
1D Compatibility (HY) -17600 + (ID) 4900
Total energy: -190654.0 ( -113.48 by residue)
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_2J1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J1P-query.scw
PDB file : Tito_Scwrl_2J1P.pdb: