Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYH---DKEGKLTGYDVEVARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSS--TYGEIAFKYD---AQIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWES-KEKDGGASFV-INKHQEKALELINQAMRRLINKGVLKRLGEQFFGKDVSQP |
| 4H5F Chain:A ((3-226)) | ---------------------SAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKNQVVGADIDMAQAIADELGVKLEILSMSFDNVLTSLQTGKADLAVAGIS-ATDERKEVFDFSIPYYENKISFLVHKAD--VEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQLTSLTNMGEAVNELQAGKIDAVHMDEPVALSY--AAKNAGLAVATVSLKMKDGDANAVALRKNSDDLKEVVDKVIQKLKDEGTYQSYLEKAASLTEV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85958 for 1742 contacts (-49.3/contact) +
2D Compatibility (PS) -23835 + (NN) -16939 + (LL) 2432
1D Compatibility (HY) -10000 + (ID) 3250
Total energy: -137550.0 ( -78.96 by residue)
QMean score : 0.495
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