Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHLAPLIHIPFKALWLGTALSMFLSLNLNAEENPTKTEPKPAKGVKNKPKSPVTNVMMTNCDNLKDFNAKQKEVLKAAYQFGSKENLGYEMAGIAWKESCAGTYKIN---FSDPSAGIYHAYIPSVLKSYGHNNSPFLRNVMGELLIKDDAFASEVALKELLYWKTRY----H-----DNLKDMIKSYNKGSRWEKN---EKANADAEKYYEEIQDRIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQTLAQTETQKSQIEKSQIEEAQTQKSQEMKEAASEQAIKKPLEKEKDKPMYLAQINSADFAPAKKSPKKPAKASPKRSSKNNISVKSNTKTASKNKEVCKNCSPGQRNAILANHITLMQEL |
1GBS Chain:A ((49-184)) | -----------------------------------------------------------------------KTIIKKVGEKLCVEPAV---IAGIISRESHAGKVLKNGWGDRGNGFGLMQVDKRSHK-PQG---------------TWNGEVHITQGTTILTDFIKRIQKKFPSWTKDQQLKGGISAYNAGAGNVRSYARMDIGTTHDDYANDVVARAQYYKQHGY------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14705 for 893 contacts (16.5/contact) +
2D Compatibility (PS) -13340 + (NN) -8909 + (LL) 13560
1D Compatibility (HY) 800 + (ID) 1150
Total energy: 5666.0 ( 6.34 by residue)
QMean score : 0.289
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