Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSVTIKSIKA----KLGKNHYHKVSGSHQVGGAHKVISSFNTKNPFFIRQHLKSH
2ARY Chain:B ((232-289))
-ALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSVTGAKQVNYRGQVVSLIRMRNPWGEVEWTGAW
General information:
TITO was launched using:
RESULT:
Template:
2ARY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4018 for 241 contacts (16.7/contact) +
2D Compatibility (PS) -5755 + (NN) -14 + (LL) 208
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -6443.0 ( -26.73 by residue)
QMean score : 0.095
(partial model without unconserved sides chains):
PDB file :
Tito_2ARY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ARY-query.scw
PDB file :
Tito_Scwrl_2ARY.pdb
: