Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTETDNFNKQDKHKLDYRKINYESKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQNPKHKRTWWSLWLYKKPSDDALDIKVLDVFDDGKYTYFRYDRDQAFSKFPYTYKVVDGYDNPINSRVVGNYIIAEDISKKWTLRSGKEYVCVRRDKRKYQKSRDFMRLKRLLEQDEAMKAKRNNMHLIEDTTPQPKNAISVTELLAQIKNQTPSKECRALNEEEVKTLEEVKNIIKTPKPLQKDLKKNAKKHTIKTQYCVPIPYIERLKTTDGLEKHQKGLNNTKKQIQANPIEEIKENKK |
| 1K8K Chain:G ((70-106)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDNSSAVLLQWHEKALAAGGVGSIVRVLTARKTV---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1955 for 149 contacts (13.1/contact) +
2D Compatibility (PS) -3697 + (NN) 781 + (LL) 13856
1D Compatibility (HY) -2800 + (ID) 350
Total energy: 9745.0 ( 65.40 by residue)
QMean score : 0.548
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