Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFELTKKTKFDGEMIGYTEELLTFLVRDFFNGIFKSKVIPKMPIFCGDVKCEDFNALRSLVYLSVLELEETINPNKIPF
1DJ8 Chain:A ((11-25))
--------------------------------------------KPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPE
General information:
TITO was launched using:
RESULT:
Template:
1DJ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1634 for 53 contacts (-30.8/contact) +
2D Compatibility (PS) -1425 + (NN) -29 + (LL) 3468
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -1070.0 ( -20.19 by residue)
QMean score : 0.091
(partial model without unconserved sides chains):
PDB file :
Tito_1DJ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DJ8-query.scw
PDB file :
Tito_Scwrl_1DJ8.pdb
: