Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKCEKRVFDSLPSTQTYLLEKLKSNKLKAPVLVLAKNQSAGIGSRGNIWEIVESALTFSLALNASDLPKDLPMQASALYLGFL-FKEVLKELGSQTWLKWPNDLYLGDQKIGGVMVNVYKGMRVCGIGVNRVSTKWACLDIGASDDWIIESFLKKIEENLFWGEVLSKYALEFHRSNSFNFHNDWGEAVSLKDAELLEDGRICIKGKIYDRM
2DTI Chain:A ((16-131))
--------FQEITSTNEFA----KTSYLEEGTVIVADKQTMGHGRLNRKWESPEGGLWLSIVLSPKVPQKDLP---KIVFLGAVGVVETLKEFSIDGRIKWPNDVLVNYKKIAGVLVEGKGDKIVLGIGLNVNNKVPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDGSFEGIAEDIDDFGRL
General information:
TITO was launched using:
RESULT:
Template:
2DTI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51887 for 826 contacts (-62.8/contact) +
2D Compatibility (PS) -12709 + (NN) -10503 + (LL) 1844
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -83255.0 ( -100.79 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_2DTI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DTI-query.scw
PDB file :
Tito_Scwrl_2DTI.pdb
: