Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTFLIALALTASLIGAENTKWDYKNKENGPHRWDKLHKDFEVCKSGKSQSPINIEHYYHTQDKA--DLQFKYAASKPKAVFFTHHTLKASFEPT-NHINYRGH----DYVLDNVHFH------APMEFLINNKTRPLSAHFVHKDAK----GR-------LLVLAIGFEEGKENPNLDPILEGIQ------KKQNLKEVALDAFLPKSINYYHFNGSLTAPPCTEGVAWFVIEEPLEVSAKQLAEIKKRMKNS---------PNQRPVQPDYNTVIIKSSAETR |
| 4Q08 Chain:A ((5-258)) | ----------------------WGY-GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNGHSFKVEFDDSQDKAVLKGGPLDGTYRLTQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHWNTKYGDAGKASQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTNFDPRGLLPESLDYWTYPGSLTTPPLNECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASFK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95356 for 1660 contacts (-57.4/contact) +
2D Compatibility (PS) -22756 + (NN) -4330 + (LL) 2620
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -137072.0 ( -82.57 by residue)
QMean score : 0.485
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