Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVFKRLEKLFSKIQNDKVYGVEHGVEVVKSLASAKFDETVEVALRLGVDPRHADQMVRGAVVLLHGTGKKVRVAVFAKDIKQDEAKNAGADVVGGDDLAEEIKNGRIDFDMVIATPDMMAVVG-KVGRILGPKGLMPNPKTGTVTMDIAKAVTNAKSGQVNFRVDKKGNVHAPIGKASFPEEKIKENMLELVKTINRLKPSSAKGKYIRNAALSLTMSPSVNLDAQELMDIK
1ZHO Chain:A ((5-227))
------KRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS-----
General information:
TITO was launched using:
RESULT:
Template:
1ZHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115448 for 1767 contacts (-65.3/contact) +
2D Compatibility (PS) -24219 + (NN) -10643 + (LL) 1420
1D Compatibility (HY) -17600 + (ID) 5500
Total energy: -171990.0 ( -97.33 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_1ZHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZHO-query.scw
PDB file :
Tito_Scwrl_1ZHO.pdb
: