Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIK--------TAEQQNASDAEISHMKKQKLKLKDEIHSMIIEYREKQKSERA
3H2P Chain:A ((47-99))
-VHEFGDNTAGCTSAGPHFNP------------RHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKAVAGSRL
General information:
TITO was launched using:
RESULT:
Template:
3H2P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4416 for 114 contacts (38.7/contact) +
2D Compatibility (PS) -3141 + (NN) 1191 + (LL) 948
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 1664.0 ( 14.60 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_3H2P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H2P-query.scw
PDB file :
Tito_Scwrl_3H2P.pdb
: