Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTEMKSFLKLFAQPLLVVLAFMLLYALAHAVLGFYVKKDSAPMSPNVEKSETERQNSTFSPKEEANATTTATEQNPTKDTVPPLDTATQKQEIKQEIKQEIKQEIKQEIKQEIKQEIKQETKQEQEKENKPKQNSVSPVQNDQKTPTTPLMGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLIKNKSVKVLEIQNDWAEIEFSHETKGYVFLKLLKKAE |
| 2KQ8 Chain:A ((5-62)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------YYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSKINY-NGQTGYIGTRYLSKLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16430 for 362 contacts (-45.4/contact) +
2D Compatibility (PS) -5703 + (NN) 4800 + (LL) 11672
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -10961.0 ( -30.28 by residue)
QMean score : 0.265
|
|
|