Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRFDLRPLKADIFERLEELIEKEM-QPNEVAIFMFEVGDFSNIPKSAEFIQSKGHELLNSLRFNQADWTIVVRKKA
3QYY Chain:A ((25-58))
------------CEQAMRDSVTAAQREGWPFVLFVLDMDNLKPINDRFGHLAGDRVLVRLVESAYGWLGAQDWIGRW
General information:
TITO was launched using:
RESULT:
Template:
3QYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4505 for 118 contacts (-38.2/contact) +
2D Compatibility (PS) -3961 + (NN) -4312 + (LL) 872
1D Compatibility (HY) -3200 + (ID) 100
Total energy: -15206.0 ( -128.86 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_3QYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QYY-query.scw
PDB file :
Tito_Scwrl_3QYY.pdb
: