Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLFLLEYAKVFALGVVKACDEAVMREFSNAIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGSIKEVAVAVLACGWSYLVIAQNLSQIPNALEDAFYGHWIKGYSSKEFQACVTWNINLLDSLALASSKQEIEKLKEIFIATSEYEYQFWDMAYQS
2QZC Chain:A ((11-206))
------LINGVGELWNKYVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTK-ILNLVFSS--KGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYA-NLDWNKFLVAWTPCMFGYSIVGDYVIDSPNEV----YKTWASFYASTEYKKRIEAILYALDEVSIT------EDLLNIFINSVRFEIGFWDASLRK
General information:
TITO was launched using:
RESULT:
Template:
2QZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135341 for 1525 contacts (-88.7/contact) +
2D Compatibility (PS) -20410 + (NN) -5416 + (LL) 1776
1D Compatibility (HY) -16400 + (ID) 2250
Total energy: -178041.0 ( -116.75 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2QZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QZC-query.scw
PDB file :
Tito_Scwrl_2QZC.pdb
: