Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISIKSPKEIKALRKAGELTAQALALLEREVRPGVSLLELDKMAEDFI-KSSHARPAFKGLYGFPNSVCMSLNEVVIHGIPTDY-VLQEGDIIGLDLGVEVDGYYGDSALTLPIGAISPQDEKLLACSKESLMHAISSIRVGMHFKELSQILEGAITERGFVPLKGFCGHGIGKKPHEEPEIPNYLEKGVKANSGPKIKEGMVFCLEPMVCQKQGEPKILADKWSVVSVDGLNTSHHEHTIAIVGNKAVILTER
4A6W Chain:A ((2-251))
-AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGQGFHEEPQVLHYDSR----ETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLR
General information:
TITO was launched using:
RESULT:
Template:
4A6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114623 for 2163 contacts (-53.0/contact) +
2D Compatibility (PS) -27518 + (NN) -11435 + (LL) 436
1D Compatibility (HY) -18400 + (ID) 4850
Total energy: -176390.0 ( -81.55 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_4A6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A6W-query.scw
PDB file :
Tito_Scwrl_4A6W.pdb
: