Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLAKMSFMQNVKNIQEVDVNHKRVLIRVDFNVPLDENLNITDDTRIRESLPTIQFCIDNKAKDIILVSHLGRPKGVE--EKLSLKPFLKRLERLLNHEVVFSQNIA--QLKQALNENAPTRIFLLENIRF-----LKGEEENDENLAKD----------LASLCDVFVNDAFGTSHRKHASTYGTAKFAPIKVSGFLLKKEIDSFYQAFNHPLRPLLLIVGGAKVSSKLTLLKNILDLIDKLIIAGAMSNTFLKAL-GYDVQDSSVEDALINDALELLQSAKEKKVKVYLPIDAVTTDDILNPKHIKISPVQDIEPKHKIA-DIGPASLKLFSEVIESAPTILWNGPLGVHEKQEFARGTTFLAHKIANTYA---FSLIGGGDTIDAINRAGEKDNMSFISTGGGASLELLEGKILPCFEVLDKRH
2PAA Chain:A ((8-413))-------------LDKVDLKGKRVIMRVDFNVPMKNN-QITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRPDGIPMPDKYSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIILLENLRFHVEEEGKGKDSSGKKISADPAKVEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKASGFLMKKELDYFSKALEKPERPFLAILGGAKVKDKIQLIKNMLDKVNFMIIGGGMAYTFLKELKNMQIGASLFDEEGATIVKEIMEKAEKNGVKIVFPVDFVTGDKFDENAKVGQATIESGIPSGWMGLDCGPESIKINAQIVAQAKLIVWNGPIGVFEWDAFAKGTKALMDEVVKATSNGCVTIIGGGDTATCCAKWGTEDKVSHVSTGGGASLELLEGKILPGVEALSNM-


General information:
TITO was launched using:
RESULT:

Template: 2PAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -234049 for 3329 contacts (-70.3/contact) +
2D Compatibility (PS) -41158 + (NN) -16564 + (LL) 1624
1D Compatibility (HY) -36000 + (ID) 8250
Total energy: -334397.0 ( -100.45 by residue)
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_2PAA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PAA-query.scw
PDB file : Tito_Scwrl_2PAA.pdb: