Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLEGLSLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKERDYLEEKIITLENKFKDMGHYAASDEVNEKQVLKMYQEGYS---VDSISK--EFKVSKGEVEFILNMAGLKW |
4PO2 Chain:A ((129-226)) | -------------------------------------------------------------KGRLSKEEIERMVQE--------AEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19238 for 492 contacts (39.1/contact) +
2D Compatibility (PS) -10041 + (NN) -4444 + (LL) 6448
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: 8401.0 ( 17.08 by residue)
QMean score : 0.339
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