Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKITHQIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNPRTKNRPSVDGRISVKGMVIFSVSNALLFVGVSYFINPLAFKLSLPFLIILGGYSYFKRFSSLAHFVVGLALGLAPIAGSVAVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLVALICWLCFVKCYHGGLFAYLGLGVSALILLYEQILVARDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA |
| 3UKW Chain:C ((13-25)) | -----------------------------------------------------------------------EWDEDEEPPRKRKRLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1525 for 33 contacts (46.2/contact) +
2D Compatibility (PS) -1500 + (NN) -2553 + (LL) 24048
1D Compatibility (HY) 400 + (ID) 200
Total energy: 21720.0 ( 658.18 by residue)
QMean score : 0.764
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